CDS

Accession Number TCMCG029C09558
gbkey CDS
Protein Id XP_023755341.1
Location complement(join(415774..415781,416056..416218,416308..416410,416494..416574,416647..416723,416826..416897,416969..417045,417117..417177,417250..417347,417410..417801,417883..417948,418027..418106,418185..418553,418632..418796,418868..418932,419019..419144,419305..419411,419504..419706,419857..419956,420089..420171,420269..420319,420406..420921,421156..421314))
Gene LOC111903829
GeneID 111903829
Organism Lactuca sativa

Protein

Length 1073aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA432228
db_source XM_023899573.1
Definition tRNA ligase 1 isoform X2 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category S
Description atrnl,rnl
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000394        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003972        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006388        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0008452        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010069        [VIEW IN EMBL-EBI]
GO:0010070        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042245        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGTATTCGTATCCCACTCTGCAATAACTTCTACTCGCACTCTCTGTTCTTCTTCGAGGAGTTTCAGTTTCGTTCGCTTTCTCTCTATCCATTTCGTTCATCGTCCTCGCTTTATCATCGCTTCTAACATCTCGGATTTCATGCCGCGTAACCAGAAAAGAGGAGGTCGACCAGACCAAAGGTGGATTCAGAAGCCAAGCAGTAGCAAAACGGATGAAACGTTTGATGCTGCAGAAGTTAAGTCTGCAGCTTCTACTGAGGCTATCACAAATGGAGTTAATAGGCTTGCTATTGCTGAAAACAGTGCACGATCCTCTGTTCCTGTGCCACAGTTTGGGAGTATCACCGTGGATGATGTAGCAGTAGCACCTCCTCATGGTCAAAGCAATGGACAGTCGTCCCATGTTTCAGTTGGATGTTCTCCAGTAATAAATGCCAACTCTTTACATGGTAAAAAATATGTCTACCAACCAAAGTCTTATGGGACAGTTTCTGGTGATGCCGCAAAAGAAACTACCAGACAGGAAGCTGCAGCTCAAACTGCTGCTTTGAGCCGTTTGTTTAAAAAAGATTTGTTGGAGAATTTTAATGTAGATAACTCGACTTACTCCAGTGCCAAAATCAGAGCAACATTCTATCCCAAATTTGAAAATGAGAAGTCTGATCAAGAGGTTAGGATAAGGATGATTGAAATGGTCTCAAAAGGCCTAGCTACAGTGGAGGTTTCACTCAAACACTCTGGATCTCTTTTTATGTATGCTGGCCATGAGGGTGGAGCGTATGCAAAGAACAGCTTTGGGAATGTTTATACTGCAGTTGGAGTTTTTGTTCTTGGAAGAATATTTCGCAAGGCATGGGGGACAGAAGCCAGCAAAAAGCAAGCAGAATTCAATGAATTCCTTGAGCGAGAACACATGAGCATATCAATGGAGTTAGTGACTGCTGTTCTAGGAGACCATGGACAGAGACCTCGTGAAGATTATGTTGTTGTGACAGCTGTCACTGAATTGGGCAATGGGAAGCCAAAGTTCTACTCCACTCCAGAGATTATTGCATTTTGCAGAAAATGGCGTTTACCTACAAATCATATTTGGTTGTTTTCCACAAGGCACTCTGTAACATCATTTTTTGCTTCTTACGATGCTCTATGTGAGGAAGGCACAGCTACATCTGTATGTAAAGCTCTTGATGAGGTGGCAGATATCTCTGTGCCAGGATCAATAGACCACATAAAGGTGCAGGGTGAGATTTTGGAGGGTCTTGTTGCACGTATTGTAAGCCATGAAAGCACAAAACAAATGGAGCTTGTTTTACAAGATTACCCTTCACCCATAGAGGAAGTTGATCAAGATTTGGGACCAGGTCTACGGGAAATATGTGCTGCAAATAGATCTGATGAGAAACAACAAATAAAGGCACTTCTTGAAAATGTTGGGAAATCATTTTGTCCAAATTATGTGGATTGGTTTGGATTTGAAGCTGCTGATATACCTCCAAGAAATGCTGATAAATCAGTTGTTTCCAAATTTCTACAAACAAATCCTTCTGATCATACTACCTTTAAATTAAAGGAAATGGTCAGATTGATGAAAGAAAAACGTTTTCCTGCTGCTTTCAAGTGTTACTATAATTTCCACAAAATTAATTCAATGTCTAGTGATAATCTTCATTATAAAATGGTGATCCATGTGCATAGTGATTCAACCTTCAGGAGATACCAAAAAGAGATGAGATTCAAGCCAGATTTATGGCCACTATATCGAGGTTTTTTTGTTGAAATTAATCTGTTCAAGGCAAGTAAAGAGAAATCCGCAGAGATTTCCAAAAATACCCCTGACATTGGAAAAAATTACAAAGATGGCAATGAAACGTCTACAAAAAACAGTTTAGCAGATGAAGATGCAAATCTAATGATCAAGCTGAAATTTCTTACATATAAGCTGCGAACTTTCTTGATTCGCAACGGGCTGTCGATTCTTTTCAAAGAAGGTCCAGCTGCCTATAAAACCTACTACCTCAGGCAAATGAAGATATGGAATACATCACCAGGAAAGCAGAGACAACTCAGTAAGATGTTGGATGAATGGGCAGTGTACATAAGAAGGAAATACGGGAACAAACAGCTGTCATCATCAATCTACTTGAGTGAAGCTGAGCCTTTTCTTGAACAATATGCAAAAAGGAGTGAAGAAAATCAAGCTTTGATAGGGTGTGCTGGAGATTTAGTAAGAACTGAAGGTTTTTTGGCCATTGTTGATGGAGGTAGAGATGCAGAAGAAGGTGATTTGGAGAGTGAGAAGGTTCTAGAAGCTTCTAGTCCAAAACCAGATGCTGTACATAAAAAGGAAGGTCTTATAATATTCTTTCCTGGAATACCTGGTTGTGCTAAATCTGCACTCTGTAAGGAAATTTTAAGTGGCTCAGAAAGTCTTGAAGATGATCGACCTATTCATAGTCTCATGGGTGACCTTATAAAAGGGAAATATTGGCAAAGAGTTGCGGATGAGAGACGAAAGAAACCTTATTCTATTCTCCTTGCTGACAAAAATGCCCCTAATGAAGAAGTATGGAGGCAGATTGAGAACATGTGTCGTACCACTAAAGCATCTGCTGTACCAATTATTCCAGATTCTGAAGGAAGTGAATCAAATCCATTTTCTCTTGATGCATTAGCAGTTTTCATATATCGTGTAGTCAACCGAGTCAATCACCCTGGAAATCTTGATAAATCGTCTCCAAATGCTGGATTCGTGTTGCTAATGTTCTATCACCTATATGATGGAAAGAGTCGTAGAGAATTTGAAAGTGAACTTATAGAGCGTTTTGGATCCCTTGTAAAGATGCCTCTCTTGAAATCTGAAAGGGCCCCACTACCTGATTCAGTGAAGACAATATTGGAAGAGGGAATTAATCTATACAGGCTGCATACTAATAGGCACGGGAGATTAGAGTCGACTAAAGGAACATACATAAGGGAGTGGGTTACATGGGAAAAGCAACTTCGTGAGGTTTTATTTCAAAATGCTGAGTATTTGACATCTATTCAGGTTCCATTTGAATTTGCTGTTAATCATGTGAAAGAAGAGCTGAAAAAAATCACAAAAGGAGAATACGAAACACCAACAAGCGAAAAAAGGAAATTTGGAACCATAGTTTTTGCTGCCATTGATGTTCCTGTTGCAGACGTTCATAACCTCCTTTCAAATGTGAATAGGTGA
Protein:  
MSVFVSHSAITSTRTLCSSSRSFSFVRFLSIHFVHRPRFIIASNISDFMPRNQKRGGRPDQRWIQKPSSSKTDETFDAAEVKSAASTEAITNGVNRLAIAENSARSSVPVPQFGSITVDDVAVAPPHGQSNGQSSHVSVGCSPVINANSLHGKKYVYQPKSYGTVSGDAAKETTRQEAAAQTAALSRLFKKDLLENFNVDNSTYSSAKIRATFYPKFENEKSDQEVRIRMIEMVSKGLATVEVSLKHSGSLFMYAGHEGGAYAKNSFGNVYTAVGVFVLGRIFRKAWGTEASKKQAEFNEFLEREHMSISMELVTAVLGDHGQRPREDYVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHIWLFSTRHSVTSFFASYDALCEEGTATSVCKALDEVADISVPGSIDHIKVQGEILEGLVARIVSHESTKQMELVLQDYPSPIEEVDQDLGPGLREICAANRSDEKQQIKALLENVGKSFCPNYVDWFGFEAADIPPRNADKSVVSKFLQTNPSDHTTFKLKEMVRLMKEKRFPAAFKCYYNFHKINSMSSDNLHYKMVIHVHSDSTFRRYQKEMRFKPDLWPLYRGFFVEINLFKASKEKSAEISKNTPDIGKNYKDGNETSTKNSLADEDANLMIKLKFLTYKLRTFLIRNGLSILFKEGPAAYKTYYLRQMKIWNTSPGKQRQLSKMLDEWAVYIRRKYGNKQLSSSIYLSEAEPFLEQYAKRSEENQALIGCAGDLVRTEGFLAIVDGGRDAEEGDLESEKVLEASSPKPDAVHKKEGLIIFFPGIPGCAKSALCKEILSGSESLEDDRPIHSLMGDLIKGKYWQRVADERRKKPYSILLADKNAPNEEVWRQIENMCRTTKASAVPIIPDSEGSESNPFSLDALAVFIYRVVNRVNHPGNLDKSSPNAGFVLLMFYHLYDGKSRREFESELIERFGSLVKMPLLKSERAPLPDSVKTILEEGINLYRLHTNRHGRLESTKGTYIREWVTWEKQLREVLFQNAEYLTSIQVPFEFAVNHVKEELKKITKGEYETPTSEKRKFGTIVFAAIDVPVADVHNLLSNVNR